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Plant Genotyping
Methods and Protocols, Methods in Molecular Biology 1245
ISBN/EAN: 9781493919659
Umbreit-Nr.: 7027931
Sprache:
Englisch
Umfang: xi, 315 S., 21 s/w Illustr., 34 farbige Illustr.,
Format in cm:
Einband:
gebundenes Buch
Erschienen am 06.11.2014
Auflage: 1/2014
- Zusatztext
- Inhaltsangabe1. Advances in Plant Genotyping - Where the Future Will Take Us Dhwani A. Patel, Manuel Zander, Jessica Dalton-Morgan, and Jacqueline Batley 2. Molecular Marker Applications in Plants Alice C. Hayward, Reece Tollenaere, Jessica Dalton-Morgan, and Jacqueline Batley 3. Bioinformatics: Identification of Markers from Next Generation Sequence Data Pradeep Ruperao and David Edwards 4. Molecular Marker Databases Kaitao Lai, Michal Lorenc, and David Edwards 5. Plant Genotyping Using Fluorescently Tagged Inter Simple Sequence Repeats (ISSRs): Basic Principles and MethodologyLinda M. Prince 6. SSR Genotyping Annaliese S. Mason 7. Genotyping Analysis Using an RFLP Assay Shutao Dai and Yan Long 8. DNA Barcoding for Plants Natasha de Vere, Tim C.G. Rich, Sarah A. Trinder and Charlotte Long 9. Multiplexed Digital Gene Expression Analysis for Genetical Genomics in Large Plant PopulationsChristian Obermeier, Bertha M. Salazar-Colqui, Viola Spamer, and Rod Snowdon 10. SNP Genotyping by Heteroduplex Analysis Norma Paniego, Corina Fusari, Verónica Lia, and Andrea Puebla 11. Application of the High-Resolution Melting Technique for Gene Mapping and SNP Detection in PlantsDavid Chagne 12. Challenges of Genotyping Polyploid Species Annaliese S. Mason 13. Genomic Reduction Assisted Single Nucleotide Polymorphism Discovery using 454-PyrosequencingPeter J. Maughan, Joshua A. Udall, and Eric N. Jellen 14. Inter-SINE Amplified Polymorphism (ISAP) for Rapid and Robust Plant GenotypingTorsten Wenke, Kathrin M. Seibt, Thomas Döbel, Katja Muders, and Thomas Schmidt 15. Screening of Mutations by TILLING in PlantsNian Wang and Lei Shi 16. Gene Analysis Using Mass Spectrometric Cleaved Amplified Polymorphic Sequence (MS-CAPS) with Matrix-Assisted Laser Desorption Ionization Time-of-Flight Mass Spectrometry (MALSI-TOF) Hideyuki Kajiwara 17. Quantitative SNP Genotyping of Polyploids with MassARRAY and Other Platforms Marcelo Mollinari and Oliver Serang 18. SNP Genotyping using KASPar Assays Scott M. Smith and Peter J. Maughan 19. Skim Based Genotyping by Sequencing Agnieszka A. Golicz, Philipp E. Bayer, and David Edwards 20. The Restriction Enzyme Target Approach to Genotyping by Sequencing (GBS) Elena Hilario 21. Methods for the Design, Implementation and Analysis of Illumina Infinium SNP Assays in PlantsDavid Chagné, Luca Bianco, Cindy Lawley, Diego Micheletti, and Jeanne M.E. Jacobs 22. Use of the Illumina GoldenGate Assay for Single Nucleotide Polymorphism (SNP) Genotyping in Cereal CropsShiaoman Chao and Cindy Lawley
- Kurztext
- The ability to produce vast amounts of DNA sequence data has enabled the discovery of molecular markers in model organisms, crops, as well as orphan species making genotyping the rate limiting factor, and this volume focuses on the different markers available and the low to high throughput genotyping of these markers. Given the diverse nature of some of these systems, an overview is provided on the identification of markers from sequence data, as well as data analysis with example applications once the genotyping data has been generated. Written in the successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible protocols, and notes on troubleshooting and avoiding known pitfalls. Authoritative and easily accessible, Plant Genotyping: Methods and Protocols is aimed at plant molecular biologists, geneticists, plant breeders and ecologists who have a target question and need to know the most suitable markers and genotyping system to use.